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dbVar

Database of genomic structural variation

nsv6625674

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:40,847

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1107 SVs from 88 studies. See in: genome view

Remapped(Score: Perfect):16,885,121-16,925,967

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6625674	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	16,885,121	16,925,967
nsv6625674	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	17,211,616	17,252,462

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18312189	duplication	OSC7423	SNP array	Probe signal intensity	17
nssv18315010	duplication	OSC8104	SNP array	Probe signal intensity	7
nssv18316854	duplication	OSC8287	SNP array	Probe signal intensity	9
nssv18319691	duplication	OSC8751	SNP array	Probe signal intensity	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18312189	Remapped	Perfect	NC_000001.11:g.(?_ 16885121)_(1692596 7_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	16,885,121	16,925,967
nssv18315010	Remapped	Perfect	NC_000001.11:g.(?_ 16885121)_(1692596 7_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	16,885,121	16,925,967
nssv18316854	Remapped	Perfect	NC_000001.11:g.(?_ 16885121)_(1692596 7_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	16,885,121	16,925,967
nssv18319691	Remapped	Perfect	NC_000001.11:g.(?_ 16885121)_(1692596 7_?)dup	GRCh38.p12	First Pass	NC_000001.11	Chr1	16,885,121	16,925,967
nssv18312189	Submitted genomic		NC_000001.10:g.(?_ 17211616)_(1725246 2_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	17,211,616	17,252,462
nssv18315010	Submitted genomic		NC_000001.10:g.(?_ 17211616)_(1725246 2_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	17,211,616	17,252,462
nssv18316854	Submitted genomic		NC_000001.10:g.(?_ 17211616)_(1725246 2_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	17,211,616	17,252,462
nssv18319691	Submitted genomic		NC_000001.10:g.(?_ 17211616)_(1725246 2_?)dup	GRCh37 (hg19)		NC_000001.10	Chr1	17,211,616	17,252,462

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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