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dbVar

Database of genomic structural variation

nsv6625763

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:34,667

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1050 SVs from 76 studies. See in: genome view

Remapped(Score: Perfect):1,477,279-1,511,945

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6625763	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	1,477,279	1,511,945
nsv6625763	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	1,412,659	1,447,325

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18297702	deletion	OSC4930	SNP array	Probe signal intensity	8
nssv18300483	deletion	OSC5455	SNP array	Probe signal intensity	nssv18300481, nssv18300482, nssv18300828
nssv18302101	deletion	OSC5710	SNP array	Probe signal intensity	5

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18297702	Remapped	Perfect	NC_000001.11:g.(?_ 1477279)_(1511945_ ?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	1,477,279	1,511,945
nssv18300483	Remapped	Perfect	NC_000001.11:g.(?_ 1477279)_(1511945_ ?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	1,477,279	1,511,945
nssv18302101	Remapped	Perfect	NC_000001.11:g.(?_ 1477279)_(1511945_ ?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	1,477,279	1,511,945
nssv18297702	Submitted genomic		NC_000001.10:g.(?_ 1412659)_(1447325_ ?)del	GRCh37 (hg19)		NC_000001.10	Chr1	1,412,659	1,447,325
nssv18300483	Submitted genomic		NC_000001.10:g.(?_ 1412659)_(1447325_ ?)del	GRCh37 (hg19)		NC_000001.10	Chr1	1,412,659	1,447,325
nssv18302101	Submitted genomic		NC_000001.10:g.(?_ 1412659)_(1447325_ ?)del	GRCh37 (hg19)		NC_000001.10	Chr1	1,412,659	1,447,325

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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