nsv6625948
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:174,155
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2454 SVs from 114 studies. See in: genome view
Overlapping variant regions from other studies: 2454 SVs from 114 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6625948 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 196,743,486 | 196,917,640 |
| nsv6625948 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 196,712,616 | 196,886,770 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18308029 | deletion | OSC6885 | SNP array | Probe signal intensity | 12 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18308029 | Remapped | Perfect | NC_000001.11:g.(?_ 196743486)_(196917 640_?)del | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 196,743,486 | 196,917,640 |
| nssv18308029 | Submitted genomic | NC_000001.10:g.(?_ 196712616)_(196886 770_?)del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 196,712,616 | 196,886,770 |