Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6626996

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:30,175

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 269 SVs from 41 studies. See in: genome view

Remapped(Score: Perfect):25,822,558-25,852,732

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6626996	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000021.9	Chr21	25,822,558	25,852,732
nsv6626996	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000021.8	Chr21	27,194,869	27,225,043

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18299021	deletion	OSC5218	SNP array	Probe signal intensity	7
nssv18299408	deletion	OSC5334	SNP array	Probe signal intensity	5
nssv18300890	deletion	OSC5497	SNP array	Probe signal intensity	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18299021	Remapped	Perfect	NC_000021.9:g.(?_2 5822558)_(25852732 _?)del	GRCh38.p12	First Pass	NC_000021.9	Chr21	25,822,558	25,852,732
nssv18299408	Remapped	Perfect	NC_000021.9:g.(?_2 5822558)_(25852732 _?)del	GRCh38.p12	First Pass	NC_000021.9	Chr21	25,822,558	25,852,732
nssv18300890	Remapped	Perfect	NC_000021.9:g.(?_2 5822558)_(25852732 _?)del	GRCh38.p12	First Pass	NC_000021.9	Chr21	25,822,558	25,852,732
nssv18299021	Submitted genomic		NC_000021.8:g.(?_2 7194869)_(27225043 _?)del	GRCh37 (hg19)		NC_000021.8	Chr21	27,194,869	27,225,043
nssv18299408	Submitted genomic		NC_000021.8:g.(?_2 7194869)_(27225043 _?)del	GRCh37 (hg19)		NC_000021.8	Chr21	27,194,869	27,225,043
nssv18300890	Submitted genomic		NC_000021.8:g.(?_2 7194869)_(27225043 _?)del	GRCh37 (hg19)		NC_000021.8	Chr21	27,194,869	27,225,043

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI