nsv6627875
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:280,267
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1504 SVs from 82 studies. See in: genome view
Overlapping variant regions from other studies: 1504 SVs from 82 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6627875 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 50,764,971 | 51,045,237 |
| nsv6627875 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 50,992,109 | 51,272,375 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18297289 | deletion | OSC0502 | SNP array | Probe signal intensity | nssv18296954, nssv18296960, nssv18297281 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18297289 | Remapped | Perfect | NC_000002.12:g.(?_ 50764971)_(5104523 7_?)del | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 50,764,971 | 51,045,237 |
| nssv18297289 | Submitted genomic | NC_000002.11:g.(?_ 50992109)_(5127237 5_?)del | GRCh37 (hg19) | NC_000002.11 | Chr2 | 50,992,109 | 51,272,375 |