nsv6628404
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:650,058
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 4166 SVs from 98 studies. See in: genome view
Overlapping variant regions from other studies: 4181 SVs from 99 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6628404 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 773,278 | 1,423,335 |
| nsv6628404 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000002.11 | Chr2 | 773,278 | 1,427,107 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18295443 | duplication | OSC4617 | SNP array | Probe signal intensity | nssv18295445, nssv18295986, nssv18295987 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18295443 | Remapped | Good | NC_000002.12:g.(?_ 773278)_(1423335_? )dup | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 773,278 | 1,423,335 |
| nssv18295443 | Submitted genomic | NC_000002.11:g.(?_ 773278)_(1427107_? )dup | GRCh37 (hg19) | NC_000002.11 | Chr2 | 773,278 | 1,427,107 |