nsv6629546
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:215,178
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1311 SVs from 90 studies. See in: genome view
Overlapping variant regions from other studies: 1311 SVs from 90 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6629546 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 143,904,601 | 144,119,778 |
| nsv6629546 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 144,825,754 | 145,040,931 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18297870 | duplication | OSC5054 | SNP array | Probe signal intensity | 8 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18297870 | Remapped | Perfect | NC_000004.12:g.(?_ 143904601)_(144119 778_?)dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 143,904,601 | 144,119,778 |
| nssv18297870 | Submitted genomic | NC_000004.11:g.(?_ 144825754)_(145040 931_?)dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 144,825,754 | 145,040,931 |