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dbVar

Database of genomic structural variation

nsv6629971

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:29,149

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 365 SVs from 67 studies. See in: genome view

Remapped(Score: Perfect):68,813,852-68,843,000

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6629971	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	68,813,852	68,843,000
nsv6629971	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	69,679,570	69,708,718

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18289053	deletion	OSC3344	SNP array	Probe signal intensity	5
nssv18290956	deletion	OSC3635	SNP array	Probe signal intensity	6
nssv18309789	deletion	OSC0740	SNP array	Probe signal intensity	8
nssv18322460	deletion	OSC1464	SNP array	Probe signal intensity	14

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18289053	Remapped	Perfect	NC_000004.12:g.(?_ 68813852)_(6884300 0_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,813,852	68,843,000
nssv18290956	Remapped	Perfect	NC_000004.12:g.(?_ 68813852)_(6884300 0_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,813,852	68,843,000
nssv18309789	Remapped	Perfect	NC_000004.12:g.(?_ 68813852)_(6884300 0_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,813,852	68,843,000
nssv18322460	Remapped	Perfect	NC_000004.12:g.(?_ 68813852)_(6884300 0_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	68,813,852	68,843,000
nssv18289053	Submitted genomic		NC_000004.11:g.(?_ 69679570)_(6970871 8_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,679,570	69,708,718
nssv18290956	Submitted genomic		NC_000004.11:g.(?_ 69679570)_(6970871 8_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,679,570	69,708,718
nssv18309789	Submitted genomic		NC_000004.11:g.(?_ 69679570)_(6970871 8_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,679,570	69,708,718
nssv18322460	Submitted genomic		NC_000004.11:g.(?_ 69679570)_(6970871 8_?)del	GRCh37 (hg19)		NC_000004.11	Chr4	69,679,570	69,708,718

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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