nsv6630057
- Organism: Homo sapiens
- Study:nstd224 (Zarrei et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:74,752
- Publication(s):Zarrei et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 558 SVs from 70 studies. See in: genome view
Overlapping variant regions from other studies: 556 SVs from 70 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6630057 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 141,173,071 | 141,247,822 |
| nsv6630057 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000005.9 | Chr5 | 140,552,652 | 140,627,390 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv18299036 | deletion | OSC5231 | SNP array | Probe signal intensity | nssv18299274, nssv18299623 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18299036 | Remapped | Good | NC_000005.10:g.(?_ 141173071)_(141247 822_?)del | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 141,173,071 | 141,247,822 |
| nssv18299036 | Submitted genomic | NC_000005.9:g.(?_1 40552652)_(1406273 90_?)del | GRCh37 (hg19) | NC_000005.9 | Chr5 | 140,552,652 | 140,627,390 |