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dbVar

Database of genomic structural variation

nsv6630205

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:48,332

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 539 SVs from 65 studies. See in: genome view

Remapped(Score: Perfect):105,212,458-105,260,789

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6630205	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	105,212,458	105,260,789
nsv6630205	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	104,548,159	104,596,490

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18283984	deletion	OSC0249	SNP array	Probe signal intensity	9
nssv18324685	deletion	OSC1726	SNP array	Probe signal intensity	6

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18283984	Remapped	Perfect	NC_000005.10:g.(?_ 105212458)_(105260 789_?)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	105,212,458	105,260,789
nssv18324685	Remapped	Perfect	NC_000005.10:g.(?_ 105212458)_(105260 789_?)del	GRCh38.p12	First Pass	NC_000005.10	Chr5	105,212,458	105,260,789
nssv18283984	Submitted genomic		NC_000005.9:g.(?_1 04548159)_(1045964 90_?)del	GRCh37 (hg19)		NC_000005.9	Chr5	104,548,159	104,596,490
nssv18324685	Submitted genomic		NC_000005.9:g.(?_1 04548159)_(1045964 90_?)del	GRCh37 (hg19)		NC_000005.9	Chr5	104,548,159	104,596,490

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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