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dbVar

Database of genomic structural variation

nsv6630670

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:16,463

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 226 SVs from 41 studies. See in: genome view

Remapped(Score: Perfect):140,458,036-140,474,498

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6630670	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	140,458,036	140,474,498
nsv6630670	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	140,779,173	140,795,635

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18283065	deletion	OSC0249	SNP array	Probe signal intensity	9
nssv18290792	deletion	OSC0390	SNP array	Probe signal intensity	6
nssv18295643	deletion	OSC4601	SNP array	Probe signal intensity	6
nssv18304753	deletion	OSC0635	SNP array	Probe signal intensity	12

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18283065	Remapped	Perfect	NC_000006.12:g.(?_ 140458036)_(140474 498_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	140,458,036	140,474,498
nssv18290792	Remapped	Perfect	NC_000006.12:g.(?_ 140458036)_(140474 498_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	140,458,036	140,474,498
nssv18295643	Remapped	Perfect	NC_000006.12:g.(?_ 140458036)_(140474 498_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	140,458,036	140,474,498
nssv18304753	Remapped	Perfect	NC_000006.12:g.(?_ 140458036)_(140474 498_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	140,458,036	140,474,498
nssv18283065	Submitted genomic		NC_000006.11:g.(?_ 140779173)_(140795 635_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	140,779,173	140,795,635
nssv18290792	Submitted genomic		NC_000006.11:g.(?_ 140779173)_(140795 635_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	140,779,173	140,795,635
nssv18295643	Submitted genomic		NC_000006.11:g.(?_ 140779173)_(140795 635_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	140,779,173	140,795,635
nssv18304753	Submitted genomic		NC_000006.11:g.(?_ 140779173)_(140795 635_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	140,779,173	140,795,635

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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