Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6631158

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:16,793

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 695 SVs from 87 studies. See in: genome view

Remapped(Score: Perfect):31,392,478-31,409,270

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6631158	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	31,392,478	31,409,270
nsv6631158	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	31,360,255	31,377,047

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18302153	deletion	OSC5742	SNP array	Probe signal intensity	8
nssv18305597	deletion	OSC6505	SNP array	Probe signal intensity	7
nssv18318857	deletion	OSC8804	SNP array	Probe signal intensity	11

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18302153	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3140927 0_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,409,270
nssv18305597	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3140927 0_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,409,270
nssv18318857	Remapped	Perfect	NC_000006.12:g.(?_ 31392478)_(3140927 0_?)del	GRCh38.p12	First Pass	NC_000006.12	Chr6	31,392,478	31,409,270
nssv18302153	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3137704 7_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,377,047
nssv18305597	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3137704 7_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,377,047
nssv18318857	Submitted genomic		NC_000006.11:g.(?_ 31360255)_(3137704 7_?)del	GRCh37 (hg19)		NC_000006.11	Chr6	31,360,255	31,377,047

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI