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dbVar

Database of genomic structural variation

nsv6632127

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:119,211

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 789 SVs from 74 studies. See in: genome view

Remapped(Score: Perfect):3,334,150-3,453,360

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6632127	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	3,334,150	3,453,360
nsv6632127	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	3,373,782	3,492,992

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18309416	deletion	OSC6998	SNP array	Probe signal intensity	10
nssv18312519	deletion	OSC7681	SNP array	Probe signal intensity	9

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18309416	Remapped	Perfect	NC_000007.14:g.(?_ 3334150)_(3453360_ ?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	3,334,150	3,453,360
nssv18312519	Remapped	Perfect	NC_000007.14:g.(?_ 3334150)_(3453360_ ?)del	GRCh38.p12	First Pass	NC_000007.14	Chr7	3,334,150	3,453,360
nssv18309416	Submitted genomic		NC_000007.13:g.(?_ 3373782)_(3492992_ ?)del	GRCh37 (hg19)		NC_000007.13	Chr7	3,373,782	3,492,992
nssv18312519	Submitted genomic		NC_000007.13:g.(?_ 3373782)_(3492992_ ?)del	GRCh37 (hg19)		NC_000007.13	Chr7	3,373,782	3,492,992

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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