Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6634100

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:39,698

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 329 SVs from 40 studies. See in: genome view

Remapped(Score: Perfect):80,846,083-80,885,780

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6634100	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	80,846,083	80,885,780
nsv6634100	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000023.10	ChrX	80,101,582	80,141,279

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18303147	deletion	OSC6053	SNP array	Probe signal intensity	8
nssv18307594	deletion	OSC6759	SNP array	Probe signal intensity	9
nssv18308836	deletion	OSC6980	SNP array	Probe signal intensity	13
nssv18312083	deletion	OSC7534	SNP array	Probe signal intensity	8

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18303147	Remapped	Perfect	NC_000023.11:g.(?_ 80846083)_(8088578 0_?)del	GRCh38.p12	First Pass	NC_000023.11	ChrX	80,846,083	80,885,780
nssv18307594	Remapped	Perfect	NC_000023.11:g.(?_ 80846083)_(8088578 0_?)del	GRCh38.p12	First Pass	NC_000023.11	ChrX	80,846,083	80,885,780
nssv18308836	Remapped	Perfect	NC_000023.11:g.(?_ 80846083)_(8088578 0_?)del	GRCh38.p12	First Pass	NC_000023.11	ChrX	80,846,083	80,885,780
nssv18312083	Remapped	Perfect	NC_000023.11:g.(?_ 80846083)_(8088578 0_?)del	GRCh38.p12	First Pass	NC_000023.11	ChrX	80,846,083	80,885,780
nssv18303147	Submitted genomic		NC_000023.10:g.(?_ 80101582)_(8014127 9_?)del	GRCh37 (hg19)		NC_000023.10	ChrX	80,101,582	80,141,279
nssv18307594	Submitted genomic		NC_000023.10:g.(?_ 80101582)_(8014127 9_?)del	GRCh37 (hg19)		NC_000023.10	ChrX	80,101,582	80,141,279
nssv18308836	Submitted genomic		NC_000023.10:g.(?_ 80101582)_(8014127 9_?)del	GRCh37 (hg19)		NC_000023.10	ChrX	80,101,582	80,141,279
nssv18312083	Submitted genomic		NC_000023.10:g.(?_ 80101582)_(8014127 9_?)del	GRCh37 (hg19)		NC_000023.10	ChrX	80,101,582	80,141,279

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI