Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6635875

Organism: Homo sapiens

Study:nstd227 (Kikas et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:4,450

Publication(s):Kikas et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 780 SVs from 79 studies. See in: genome view

Remapped(Score: Perfect):32,217,691-32,222,140

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv6635875	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	32,217,691	32,222,140
nsv6635875	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	32,509,892	32,514,341

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18327496	deletion	SNP array	Probe signal intensity
nssv18327497	deletion	SNP array	Probe signal intensity
nssv18327498	deletion	SNP array	Probe signal intensity
nssv18327499	duplication	SNP array	Probe signal intensity
nssv18327500	duplication	SNP array	Probe signal intensity

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nssv18327496	Remapped	Perfect	NC_000015.10:g.(32 217691_?)_(?_32222 140)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,217,691	32,222,140
nssv18327497	Remapped	Perfect	NC_000015.10:g.(32 217691_?)_(?_32222 140)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,217,691	32,222,140
nssv18327498	Remapped	Perfect	NC_000015.10:g.(32 217691_?)_(?_32222 140)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,217,691	32,222,140
nssv18327499	Remapped	Perfect	NC_000015.10:g.(32 217691_?)_(?_32222 140)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,217,691	32,222,140
nssv18327500	Remapped	Perfect	NC_000015.10:g.(32 217691_?)_(?_32222 140)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	32,217,691	32,222,140
nssv18327496	Submitted genomic		NC_000015.9:g.(325 09892_?)_(?_325143 41)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,892	32,514,341
nssv18327497	Submitted genomic		NC_000015.9:g.(325 09892_?)_(?_325143 41)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,892	32,514,341
nssv18327498	Submitted genomic		NC_000015.9:g.(325 09892_?)_(?_325143 41)del	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,892	32,514,341
nssv18327499	Submitted genomic		NC_000015.9:g.(325 09892_?)_(?_325143 41)dup	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,892	32,514,341
nssv18327500	Submitted genomic		NC_000015.9:g.(325 09892_?)_(?_325143 41)dup	GRCh37 (hg19)		NC_000015.9	Chr15	32,509,892	32,514,341

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI