nsv6637421
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:113,724
- Description:GRCh37/hg19 17q23.2(chr17:60695522-60809245)x1 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 352 SVs from 50 studies. See in: genome view
Overlapping variant regions from other studies: 352 SVs from 50 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6637421 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 62,618,161 | 62,731,884 |
| nsv6637421 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000017.10 | Chr17 | 60,695,522 | 60,809,245 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv18329709 | copy number loss | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV002473441.1, VCV001808124.1 | 1 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18329709 | Remapped | Perfect | NC_000017.11:g.(?_ 62618161)_(6273188 4_?)del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 62,618,161 | 62,731,884 |
| nssv18329709 | Submitted genomic | NC_000017.10:g.(?_ 60695522)_(6080924 5_?)del | GRCh37 (hg19) | NC_000017.10 | Chr17 | 60,695,522 | 60,809,245 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv18329709 | GRCh37: NC_000017.10:g.(?_60695522)_(60809245_?)del | copy number loss | unknown | not provided | Uncertain significance | ClinVar | RCV002473441.1, VCV001808124.1 | 1 |