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dbVar

Database of genomic structural variation

nsv6690298

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:8,747

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 126 SVs from 27 studies. See in: genome view

Submitted genomic228,480,403-228,489,149

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6690298	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	228,480,403	228,489,149
nsv6690298	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	229,345,119	229,353,865

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18450226	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18450226	Submitted genomic		NC_000002.12:g.228 480403_228489149de l	GRCh38 (hg38)		NC_000002.12	Chr2	228,480,403	228,489,149
nssv18450226	Remapped	Perfect	NC_000002.11:g.229 345119_229353865de l	GRCh37.p13	First Pass	NC_000002.11	Chr2	229,345,119	229,353,865

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18450226	8.5e-05	24	275800

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