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dbVar

Database of genomic structural variation

nsv6708321

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:32,100

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 208 SVs from 38 studies. See in: genome view

Submitted genomic9,926,501-9,958,600

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6708321	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	9,926,501	9,958,600
nsv6708321	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	9,968,185	10,000,284

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18681472	duplication	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18681472	Submitted genomic		NC_000003.12:g.992 6501_9958600dup	GRCh38 (hg38)		NC_000003.12	Chr3	9,926,501	9,958,600
nssv18681472	Remapped	Perfect	NC_000003.11:g.996 8185_10000284dup	GRCh37.p13	First Pass	NC_000003.11	Chr3	9,968,185	10,000,284

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18681472	0.001	388	263802

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