Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6741906

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:217

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 134 SVs from 27 studies. See in: genome view

Submitted genomic141,660,907-141,661,123

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6741906	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	141,660,907	141,661,123
nsv6741906	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	142,582,060	142,582,276

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18685220	duplication	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18685220	Submitted genomic		NC_000004.12:g.141 660907_141661123du p	GRCh38 (hg38)		NC_000004.12	Chr4	141,660,907	141,661,123
nssv18685220	Remapped	Perfect	NC_000004.11:g.142 582060_142582276du p	GRCh37.p13	First Pass	NC_000004.11	Chr4	142,582,060	142,582,276

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18685220	5e-05	12	234112

You are here: NCBI