Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6749600

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:6,141

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 124 SVs from 26 studies. See in: genome view

Submitted genomic152,935,047-152,941,187

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6749600	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	152,935,047	152,941,187
nsv6749600	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	153,856,199	153,862,339

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18686246	duplication	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18686246	Submitted genomic		NC_000004.12:g.152 935047_152941187du p	GRCh38 (hg38)		NC_000004.12	Chr4	152,935,047	152,941,187
nssv18686246	Remapped	Perfect	NC_000004.11:g.153 856199_153862339du p	GRCh37.p13	First Pass	NC_000004.11	Chr4	153,856,199	153,862,339

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18686246	4e-06	1	272136

You are here: NCBI