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dbVar

Database of genomic structural variation

nsv6797878

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:103

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 141 SVs from 27 studies. See in: genome view

Submitted genomic10,616,183-10,616,285

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6797878	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000006.12	Chr6	10,616,183	10,616,285
nsv6797878	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	10,616,416	10,616,518

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18708836	duplication	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18708836	Submitted genomic		NC_000006.12:g.106 16183_10616285dup	GRCh38 (hg38)		NC_000006.12	Chr6	10,616,183	10,616,285
nssv18708836	Remapped	Perfect	NC_000006.11:g.106 16416_10616518dup	GRCh37.p13	First Pass	NC_000006.11	Chr6	10,616,416	10,616,518

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18708836	0.006	1261	222732

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