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dbVar

Database of genomic structural variation

nsv6825823

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:196,924

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 688 SVs from 70 studies. See in: genome view

Submitted genomic80,475,656-80,672,579

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6825823	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000007.14	Chr7	80,475,656	80,672,579
nsv6825823	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000007.13	Chr7	80,104,972	80,301,895

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18546486	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18546486	Submitted genomic		NC_000007.14:g.804 75656_80672579del	GRCh38 (hg38)		NC_000007.14	Chr7	80,475,656	80,672,579
nssv18546486	Remapped	Perfect	NC_000007.13:g.801 04972_80301895del	GRCh37.p13	First Pass	NC_000007.13	Chr7	80,104,972	80,301,895

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18546486	4e-06	1	276208

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