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dbVar

Database of genomic structural variation

nsv6866155

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:9,225

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 207 SVs from 48 studies. See in: genome view

Submitted genomic38,555,863-38,565,087

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6866155	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000009.12	Chr9	38,555,863	38,565,087
nsv6866155	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000009.11	Chr9	38,555,860	38,565,084

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18569382	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18569382	Submitted genomic		NC_000009.12:g.385 55863_38565087del	GRCh38 (hg38)		NC_000009.12	Chr9	38,555,863	38,565,087
nssv18569382	Remapped	Perfect	NC_000009.11:g.385 55860_38565084del	GRCh37.p13	First Pass	NC_000009.11	Chr9	38,555,860	38,565,084

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18569382	0.015	3885	253614

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