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dbVar

Database of genomic structural variation

nsv6874756

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,561

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 126 SVs from 36 studies. See in: genome view

Submitted genomic106,977,218-106,979,778

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6874756	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000009.12	Chr9	106,977,218	106,979,778
nsv6874756	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000009.11	Chr9	109,739,499	109,742,059

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18561576	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18561576	Submitted genomic		NC_000009.12:g.106 977218_106979778de l	GRCh38 (hg38)		NC_000009.12	Chr9	106,977,218	106,979,778
nssv18561576	Remapped	Perfect	NC_000009.11:g.109 739499_109742059de l	GRCh37.p13	First Pass	NC_000009.11	Chr9	109,739,499	109,742,059

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18561576	0.02	5249	275240

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