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dbVar

Database of genomic structural variation

nsv6882223

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:105

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 81 SVs from 19 studies. See in: genome view

Submitted genomic30,705,654-30,705,758

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6882223	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000010.11	Chr10	30,705,654	30,705,758
nsv6882223	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	30,994,583	30,994,687

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18335188	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18335188	Submitted genomic		NC_000010.11:g.307 05654_30705758del	GRCh38 (hg38)		NC_000010.11	Chr10	30,705,654	30,705,758
nssv18335188	Remapped	Perfect	NC_000010.10:g.309 94583_30994687del	GRCh37.p13	First Pass	NC_000010.10	Chr10	30,994,583	30,994,687

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18335188	0.004	910	260304

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