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dbVar

Database of genomic structural variation

nsv6887931

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:130,000

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 475 SVs from 64 studies. See in: genome view

Submitted genomic69,232,301-69,362,300

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6887931	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000010.11	Chr10	69,232,301	69,362,300
nsv6887931	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	70,992,057	71,122,056

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18588655	duplication	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18588655	Submitted genomic		NC_000010.11:g.692 32301_69362300dup	GRCh38 (hg38)		NC_000010.11	Chr10	69,232,301	69,362,300
nssv18588655	Remapped	Perfect	NC_000010.10:g.709 92057_71122056dup	GRCh37.p13	First Pass	NC_000010.10	Chr10	70,992,057	71,122,056

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18588655	2.2e-05	6	273030

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