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dbVar

Database of genomic structural variation

nsv6891914

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:47

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 187 SVs from 28 studies. See in: genome view

Submitted genomic133,646,639-133,646,685

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6891914	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000009.12	Chr9	133,646,639	133,646,685
nsv6891914	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000009.11	Chr9	136,511,761	136,511,807

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18565781	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18565781	Submitted genomic		NC_000009.12:g.133 646639_133646685de l	GRCh38 (hg38)		NC_000009.12	Chr9	133,646,639	133,646,685
nssv18565781	Remapped	Perfect	NC_000009.11:g.136 511761_136511807de l	GRCh37.p13	First Pass	NC_000009.11	Chr9	136,511,761	136,511,807

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18565781	0.022	5318	254316

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