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dbVar

Database of genomic structural variation

nsv6905746

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:4,500

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 110 SVs from 35 studies. See in: genome view

Submitted genomic67,161,901-67,166,400

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6905746	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	67,161,901	67,166,400
nsv6905746	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	66,929,372	66,933,871

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18353093	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18353093	Submitted genomic		NC_000011.10:g.671 61901_67166400del	GRCh38 (hg38)		NC_000011.10	Chr11	67,161,901	67,166,400
nssv18353093	Remapped	Perfect	NC_000011.9:g.6692 9372_66933871del	GRCh37.p13	First Pass	NC_000011.9	Chr11	66,929,372	66,933,871

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18353093	0.001	287	253430

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