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dbVar

Database of genomic structural variation

nsv6909270

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:29,600

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 359 SVs from 76 studies. See in: genome view

Submitted genomic25,579,901-25,609,500

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6909270	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	25,579,901	25,609,500
nsv6909270	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	25,601,447	25,631,046

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18348276	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18348276	Submitted genomic		NC_000011.10:g.255 79901_25609500del	GRCh38 (hg38)		NC_000011.10	Chr11	25,579,901	25,609,500
nssv18348276	Remapped	Perfect	NC_000011.9:g.2560 1447_25631046del	GRCh37.p13	First Pass	NC_000011.9	Chr11	25,601,447	25,631,046

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18348276	0.011	2705	252594

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