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dbVar

Database of genomic structural variation

nsv6914055

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:23,100

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 308 SVs from 67 studies. See in: genome view

Submitted genomic25,585,001-25,608,100

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6914055	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	25,585,001	25,608,100
nsv6914055	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	25,606,547	25,629,646

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18348281	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18348281	Submitted genomic		NC_000011.10:g.255 85001_25608100del	GRCh38 (hg38)		NC_000011.10	Chr11	25,585,001	25,608,100
nssv18348281	Remapped	Perfect	NC_000011.9:g.2560 6547_25629646del	GRCh37.p13	First Pass	NC_000011.9	Chr11	25,606,547	25,629,646

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18348281	0.013	3278	253808

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