Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6915552

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:11,903

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 206 SVs from 25 studies. See in: genome view

Submitted genomic129,850,264-129,862,166

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6915552	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	129,850,264	129,862,166
nsv6915552	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	129,720,159	129,732,061

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18344331	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18344331	Submitted genomic		NC_000011.10:g.129 850264_129862166de l	GRCh38 (hg38)		NC_000011.10	Chr11	129,850,264	129,862,166
nssv18344331	Remapped	Perfect	NC_000011.9:g.1297 20159_129732061del	GRCh37.p13	First Pass	NC_000011.9	Chr11	129,720,159	129,732,061

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18344331	3.9e-05	11	276150

You are here: NCBI