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dbVar

Database of genomic structural variation

nsv6924638

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:6,188

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 136 SVs from 40 studies. See in: genome view

Submitted genomic124,297,100-124,303,287

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6924638	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000012.12	Chr12	124,297,100	124,303,287
nsv6924638	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000012.11	Chr12	124,781,646	124,787,833

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18357857	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18357857	Submitted genomic		NC_000012.12:g.124 297100_124303287de l	GRCh38 (hg38)		NC_000012.12	Chr12	124,297,100	124,303,287
nssv18357857	Remapped	Perfect	NC_000012.11:g.124 781646_124787833de l	GRCh37.p13	First Pass	NC_000012.11	Chr12	124,781,646	124,787,833

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18357857	1.4e-05	4	276176

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