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dbVar

Database of genomic structural variation

nsv6933314

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:21

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 243 SVs from 46 studies. See in: genome view

Submitted genomic23,942,908-23,942,928

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6933314	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000013.11	Chr13	23,942,908	23,942,928
nsv6933314	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000013.10	Chr13	24,517,047	24,517,067

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18376359	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18376359	Submitted genomic		NC_000013.11:g.239 42908_23942928del	GRCh38 (hg38)		NC_000013.11	Chr13	23,942,908	23,942,928
nssv18376359	Remapped	Perfect	NC_000013.10:g.245 17047_24517067del	GRCh37.p13	First Pass	NC_000013.10	Chr13	24,517,047	24,517,067

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18376359	0.008	2022	253194

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