Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6954759

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,300

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 69 SVs from 18 studies. See in: genome view

Submitted genomic51,355,891-51,358,190

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6954759	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000014.9	Chr14	51,355,891	51,358,190
nsv6954759	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000014.8	Chr14	51,822,609	51,824,908

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18386972	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18386972	Submitted genomic		NC_000014.9:g.5135 5891_51358190del	GRCh38 (hg38)		NC_000014.9	Chr14	51,355,891	51,358,190
nssv18386972	Remapped	Perfect	NC_000014.8:g.5182 2609_51824908del	GRCh37.p13	First Pass	NC_000014.8	Chr14	51,822,609	51,824,908

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18386972	5.3e-05	15	275096

You are here: NCBI