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dbVar

Database of genomic structural variation

nsv6973804

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:65,000

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 423 SVs from 69 studies. See in: genome view

Submitted genomic3,056,201-3,121,200

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6973804	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000016.10	Chr16	3,056,201	3,121,200
nsv6973804	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	3,106,202	3,171,201

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18622339	duplication	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18622339	Submitted genomic		NC_000016.10:g.305 6201_3121200dup	GRCh38 (hg38)		NC_000016.10	Chr16	3,056,201	3,121,200
nssv18622339	Remapped	Perfect	NC_000016.9:g.3106 202_3171201dup	GRCh37.p13	First Pass	NC_000016.9	Chr16	3,106,202	3,171,201

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18622339	4e-06	1	273248

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