Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6975406

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:5,371

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 99 SVs from 23 studies. See in: genome view

Submitted genomic66,292,810-66,298,180

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6975406	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000015.10	Chr15	66,292,810	66,298,180
nsv6975406	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000015.9	Chr15	66,585,148	66,590,518

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18395789	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18395789	Submitted genomic		NC_000015.10:g.662 92810_66298180del	GRCh38 (hg38)		NC_000015.10	Chr15	66,292,810	66,298,180
nssv18395789	Remapped	Perfect	NC_000015.9:g.6658 5148_66590518del	GRCh37.p13	First Pass	NC_000015.9	Chr15	66,585,148	66,590,518

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18395789	<0.001	32	275624

You are here: NCBI