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dbVar

Database of genomic structural variation

nsv6979795

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:32,800

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 297 SVs from 60 studies. See in: genome view

Submitted genomic15,761,101-15,793,900

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6979795	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000017.11	Chr17	15,761,101	15,793,900
nsv6979795	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000017.10	Chr17	15,664,415	15,697,214

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18408635	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18408635	Submitted genomic		NC_000017.11:g.157 61101_15793900del	GRCh38 (hg38)		NC_000017.11	Chr17	15,761,101	15,793,900
nssv18408635	Remapped	Perfect	NC_000017.10:g.156 64415_15697214del	GRCh37.p13	First Pass	NC_000017.10	Chr17	15,664,415	15,697,214

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18408635	0.003	771	256154

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