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dbVar

Database of genomic structural variation

nsv6979811

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:67,408

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 408 SVs from 61 studies. See in: genome view

Submitted genomic37,052,564-37,119,971

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6979811	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000017.11	Chr17	37,052,564	37,119,971
nsv6979811	Remapped	Good	GRCh37.p13	Primary Assembly	Second Pass	NC_000017.10	Chr17	35,409,864	35,476,893

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18408147	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18408147	Submitted genomic		NC_000017.11:g.370 52564_37119971del	GRCh38 (hg38)		NC_000017.11	Chr17	37,052,564	37,119,971
nssv18408147	Remapped	Good	NC_000017.10:g.354 09864_35476893del	GRCh37.p13	Second Pass	NC_000017.10	Chr17	35,409,864	35,476,893

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18408147	4e-06	1	276248

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