Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv7009349

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:80,400

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 375 SVs from 48 studies. See in: genome view

Submitted genomic5,661,201-5,741,600

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7009349	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	5,661,201	5,741,600
nsv7009349	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000019.9	Chr19	5,661,212	5,741,611

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18639673	duplication	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18639673	Submitted genomic		NC_000019.10:g.566 1201_5741600dup	GRCh38 (hg38)		NC_000019.10	Chr19	5,661,201	5,741,600
nssv18639673	Remapped	Perfect	NC_000019.9:g.5661 212_5741611dup	GRCh37.p13	First Pass	NC_000019.9	Chr19	5,661,212	5,741,611

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18639673	4e-06	1	272128

You are here: NCBI