Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv7019157

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:37,179

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 168 SVs from 29 studies. See in: genome view

Submitted genomic29,260,082-29,297,260

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7019157	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000021.9	Chr21	29,260,082	29,297,260
nsv7019157	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000021.8	Chr21	30,632,403	30,669,581

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18436889	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18436889	Submitted genomic		NC_000021.9:g.2926 0082_29297260del	GRCh38 (hg38)		NC_000021.9	Chr21	29,260,082	29,297,260
nssv18436889	Remapped	Perfect	NC_000021.8:g.3063 2403_30669581del	GRCh37.p13	First Pass	NC_000021.8	Chr21	30,632,403	30,669,581

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18436889	4e-06	1	276160

You are here: NCBI