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dbVar

Database of genomic structural variation

nsv7029948

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:517,486

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1417 SVs from 64 studies. See in: genome view

Submitted genomic23,568,012-24,085,497

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7029948	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000023.11	ChrX	23,568,012	24,085,497
nsv7029948	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	23,586,129	24,103,614

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18764325	inversion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18764325	Submitted genomic		NC_000023.11:g.235 68012_24085497inv	GRCh38 (hg38)		NC_000023.11	ChrX	23,568,012	24,085,497
nssv18764325	Remapped	Perfect	NC_000023.10:g.235 86129_24103614inv	GRCh37.p13	First Pass	NC_000023.10	ChrX	23,586,129	24,103,614

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18764325	5e-06	1	200000

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