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dbVar

Database of genomic structural variation

nsv7042749

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:7,678,939

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 17052 SVs from 113 studies. See in: genome view

Submitted genomic125,171,898-132,850,836

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7042749	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	125,171,898	132,850,836
nsv7042749	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	124,507,591	132,186,528

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18777249	inversion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18777249	Submitted genomic		NC_000005.10:g.125 171898_132850836in v	GRCh38 (hg38)		NC_000005.10	Chr5	125,171,898	132,850,836
nssv18777249	Remapped	Perfect	NC_000005.9:g.1245 07591_132186528inv	GRCh37.p13	First Pass	NC_000005.9	Chr5	124,507,591	132,186,528

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18777249	1.1e-05	3	275166

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