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dbVar

Database of genomic structural variation

nsv7043868

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:33,629

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 200 SVs from 37 studies. See in: genome view

Submitted genomic19,578,356-19,611,984

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7043868	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	19,578,356	19,611,984
nsv7043868	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	19,904,850	19,938,478

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18747520	inversion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18747520	Submitted genomic		NC_000001.11:g.195 78356_19611984inv	GRCh38 (hg38)		NC_000001.11	Chr1	19,578,356	19,611,984
nssv18747520	Remapped	Perfect	NC_000001.10:g.199 04850_19938478inv	GRCh37.p13	First Pass	NC_000001.10	Chr1	19,904,850	19,938,478

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18747520	0.009	2305	267192

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