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dbVar

Database of genomic structural variation

nsv7045939

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:5,976,798

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 15042 SVs from 114 studies. See in: genome view

Submitted genomic69,867,306-75,844,103

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7045939	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	69,867,306	75,844,103
nsv7045939	Remapped	Good	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	70,733,024	76,765,256

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18775591	inversion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18775591	Submitted genomic		NC_000004.12:g.698 67306_75844103inv	GRCh38 (hg38)		NC_000004.12	Chr4	69,867,306	75,844,103
nssv18775591	Remapped	Good	NC_000004.11:g.707 33024_76765256inv	GRCh37.p13	First Pass	NC_000004.11	Chr4	70,733,024	76,765,256

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18775591	7e-06	2	274954

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