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dbVar

Database of genomic structural variation

nsv7056053

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:349,944

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 877 SVs from 66 studies. See in: genome view

Submitted genomic127,478,636-127,828,579

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7056053	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	127,478,636	127,828,579
nsv7056053	Remapped	Good	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	128,236,212	128,586,153

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18765314	inversion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18765314	Submitted genomic		NC_000002.12:g.127 478636_127828579in v	GRCh38 (hg38)		NC_000002.12	Chr2	127,478,636	127,828,579
nssv18765314	Remapped	Good	NC_000002.11:g.128 236212_128586153in v	GRCh37.p13	First Pass	NC_000002.11	Chr2	128,236,212	128,586,153

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18765314	4e-06	1	276268

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