nsv7073560
- Organism: Homo sapiens
- Study:nstd229 (Jun et al. 2023)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,633,888
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 7917 SVs from 104 studies. See in: genome view
Overlapping variant regions from other studies: 7895 SVs from 104 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv7073560 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000018.10 | Chr18 | 77,216,604 | 78,850,491 | ||
| nsv7073560 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000018.9 | Chr18 | 74,928,560 | 76,610,491 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv18759602 | inversion | Sequencing | Split read and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18759602 | Submitted genomic | NC_000018.10:g.772 16604_78850491inv | GRCh38 (hg38) | NC_000018.10 | Chr18 | 77,216,604 | 78,850,491 | ||
| nssv18759602 | Remapped | Good | NC_000018.9:g.7492 8560_76610491inv | GRCh37.p13 | First Pass | NC_000018.9 | Chr18 | 74,928,560 | 76,610,491 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv18759602 | 0.024 | 6415 | 273596 |