nsv7075484
- Organism: Homo sapiens
- Study:nstd229 (Jun et al. 2023)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,691,931
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 7749 SVs from 121 studies. See in: genome view
Overlapping variant regions from other studies: 7279 SVs from 119 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv7075484 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000011.10 | Chr11 | 48,343,569 | 50,035,499 | ||
| nsv7075484 | Remapped | Pass | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 48,365,121 | 49,862,647 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv18736879 | inversion | Sequencing | Split read and paired-end mapping |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18736879 | Submitted genomic | NC_000011.10:g.483 43569_50035499inv | GRCh38 (hg38) | NC_000011.10 | Chr11 | 48,343,569 | 50,035,499 | ||
| nssv18736879 | Remapped | Pass | NC_000011.9:g.4836 5121_49862647inv | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 48,365,121 | 49,862,647 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv18736879 | 5e-05 | 14 | 272242 |