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dbVar

Database of genomic structural variation

nsv7077833

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:inversion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:353,105

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 758 SVs from 68 studies. See in: genome view

Submitted genomic122,408,687-122,761,791

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7077833	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000009.12	Chr9	122,408,687	122,761,791
nsv7077833	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000009.11	Chr9	125,170,966	125,524,070

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18784327	inversion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18784327	Submitted genomic		NC_000009.12:g.122 408687_122761791in v	GRCh38 (hg38)		NC_000009.12	Chr9	122,408,687	122,761,791
nssv18784327	Remapped	Perfect	NC_000009.11:g.125 170966_125524070in v	GRCh37.p13	First Pass	NC_000009.11	Chr9	125,170,966	125,524,070

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18784327	0.017	4386	273346

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