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dbVar

Database of genomic structural variation

nsv7090663

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:326

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 289 SVs from 30 studies. See in: genome view

Submitted genomic103,911,636-103,911,961

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7090663	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000023.11	ChrX	103,911,636	103,911,961
nsv7090663	Remapped	Perfect	GRCh37.p13	PATCHES	First Pass	NW_004070885.1	ChrX\|NW_00 4070885.1	48,052	48,377

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18457218	deletion	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18457218	Submitted genomic		NC_000023.11:g.103 911636_103911961de l	GRCh38 (hg38)		NC_000023.11	ChrX	103,911,636	103,911,961
nssv18457218	Remapped	Perfect	NW_004070885.1:g.4 8052_48377del	GRCh37.p13	First Pass	NW_004070885.1	ChrX\|NW_00 4070885.1	48,052	48,377

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18457218	0.95	205765	216676

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