Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv7092423

Organism: Homo sapiens

Study:nstd229 (Jun et al. 2023)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:235,439

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 520 SVs from 50 studies. See in: genome view

Submitted genomic73,669,580-73,905,018

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv7092423	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000023.11	ChrX	73,669,580	73,905,018
nsv7092423	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	72,889,415	73,124,853

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv18659886	duplication	Sequencing	Split read and paired-end mapping

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv18659886	Submitted genomic		NC_000023.11:g.736 69580_73905018dup	GRCh38 (hg38)		NC_000023.11	ChrX	73,669,580	73,905,018
nssv18659886	Remapped	Perfect	NC_000023.10:g.728 89415_73124853dup	GRCh37.p13	First Pass	NC_000023.10	ChrX	72,889,415	73,124,853

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv18659886	4.6e-05	10	217391

You are here: NCBI